emzed.ms_data package

Submodules

• emzed.ms_data.peak_map module
  • BoundSpectrum
    • BoundSpectrum.check()
    • BoundSpectrum.intensities
    • BoundSpectrum.ms_level
    • BoundSpectrum.mzs
    • BoundSpectrum.peaks
    • BoundSpectrum.polarity
    • BoundSpectrum.precursors
    • BoundSpectrum.rt
    • BoundSpectrum.scan_number
    • BoundSpectrum.unbind()
  • Chromatogram
  • ChromatogramType
    • ChromatogramType.ABSORPTION_CHROMATOGRAM
    • ChromatogramType.BASEPEAK_CHROMATOGRAM
    • ChromatogramType.ELECTROMAGNETIC_RADIATION_CHROMATOGRAM
    • ChromatogramType.EMISSION_CHROMATOGRAM
    • ChromatogramType.MASS_CHROMATOGRAM
    • ChromatogramType.SELECTED_ION_CURRENT_CHROMATOGRAM
    • ChromatogramType.SELECTED_ION_MONITORING_CHROMATOGRAM
    • ChromatogramType.SELECTED_REACTION_MONITORING_CHROMATOGRAM
    • ChromatogramType.TOTAL_ION_CURRENT_CHROMATOGRAM
  • DbBackedProperty
  • ImmutableMSChromatograms
  • ImmutablePeakMap
    • ImmutablePeakMap.chromatogram()
    • ImmutablePeakMap.close()
    • ImmutablePeakMap.extract()
    • ImmutablePeakMap.extract_for_precursors()
    • ImmutablePeakMap.filter()
    • ImmutablePeakMap.get_dominating_peak_map()
    • ImmutablePeakMap.get_precursors_mzs()
    • ImmutablePeakMap.is_in_memory()
    • ImmutablePeakMap.is_open()
    • ImmutablePeakMap.load()
    • ImmutablePeakMap.ms_levels()
    • ImmutablePeakMap.mz_range()
    • ImmutablePeakMap.mz_ranges()
    • ImmutablePeakMap.open()
    • ImmutablePeakMap.polarities()
    • ImmutablePeakMap.representing_mz_peak()
    • ImmutablePeakMap.rt_range()
    • ImmutablePeakMap.rt_ranges()
    • ImmutablePeakMap.save()
    • ImmutablePeakMap.scan_counts()
    • ImmutablePeakMap.split_by_precursors()
    • ImmutablePeakMap.summary()
    • ImmutablePeakMap.unique_id
  • ImmutableSpectra
    • ImmutableSpectra.add_spectrum()
  • MSChromatogram
    • MSChromatogram.available_types
    • MSChromatogram.intensities
    • MSChromatogram.mz
    • MSChromatogram.precursor_mz
    • MSChromatogram.rt_range()
    • MSChromatogram.rts
    • MSChromatogram.type
  • MutableSpectra
    • MutableSpectra.add_spectrum()
  • PeakMap
    • PeakMap.add_spectrum()
    • PeakMap.from_()
    • PeakMap.merge()
    • PeakMap.spectra_for_modification()
  • SpectraBase
  • Spectrum
    • Spectrum.unbind()
  • chromatogram()
  • create_indices()
  • create_table()
  • db_backed_property
  • extract_spectrum()
  • insert_chromatogram()
  • insert_peaks()
  • insert_precursors()
  • profile()
  • representing_mz_peak()
  • to_openms_spectrum()
• emzed.ms_data.peak_map_hasher module
  • compute_peakmap_hash()

Module contents