Python
Contents:
How to install emzed?
emzed end user API
emzed package
Subpackages
emzed.align package
emzed.annotate package
emzed.chemistry package
emzed.config package
emzed.core package
emzed.ms2 package
emzed.ms_data package
emzed.optimized package
emzed.peak_picking package
emzed.pyopenms package
emzed.quantification package
emzed.r_connect package
Submodules
Module contents
emzed.remote_package package
emzed.table package
emzed.targeted package
emzed.utils package
Submodules
Module contents
Python
»
emzed package
»
emzed.r_connect package
»
emzed.r_connect.patched_pyper module
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emzed.r_connect.patched_pyper module
¶
class
emzed.r_connect.patched_pyper.
PatchedR
(
RCMD
=
'R'
,
max_len
=
1000
,
use_numpy
=
True
,
use_pandas
=
True
,
use_dict
=
None
,
host
=
'localhost'
,
user
=
None
,
ssh
=
'ssh'
,
return_err
=
True
)
[source]
¶
Bases:
R
emzed.r_connect.patched_pyper.
on_die
(
prog
,
newline
)
[source]
¶
emzed.r_connect.patched_pyper.
sendAll
(
p
,
s
,
orig=<function
sendAll>
)
[source]
¶
emzed.r_connect.patched_pyper.
seqstr
(
obj
,
orig=<function
SeqStr>
)
[source]
¶