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emzed.targeted

Targeted-analysis helpers built on molecular-formula and adduct enumeration.

Targeted annotation helpers for combining targets with adduct and isotope space.

solution_space(targets, adducts, explained_abundance=0.999, resolution=None)

Expand target formulas into adduct and isotope hypotheses.

Parameters:

Name Type Description Default
targets

table containing at least id and mf columns.

required
adducts

adduct-definition table, typically from :mod:emzed.chemistry.adducts.

required
explained_abundance

cumulative isotope abundance to explain.

0.999
resolution

optional resolving power used for measured centroids.

None

Returns:

Type Description

table describing target/adduct/isotope combinations and expected m/z.